SciGet

SciGet MSK Webapps

Run Musculoskeletal and Body Imaging Tools in Your Browser

Segment muscles, measure fat and blood flow, and check body imaging protocols in your browser without uploading your scans.

3 apps across 2 categories

01

Segmentation

Label anatomy and pathology, then measure what you labelled.

Segmentation

MuscleMap

Segment muscles in MRI or CT and measure fat.

  • Whole body · MRI, CT
  • DICOM, NIfTI
  • WebGPU optional
  • Command line
 Segmentation

SeedSeg

Find gold fiducial markers in prostate MRI.

  • Prostate · MRI
  • DICOM, NIfTI
  • No GPU needed
  • Command line

02

Quantitative MRI

Compute quantitative tissue maps and measure blood flow.

Quantitative MRI

Carotid Flow

Measure carotid blood flow from phase-contrast MRI.

  • Neck · MRI
  • DICOM, NIfTI
  • No GPU needed
  • Command line